Publications

Foundational work in computational biology, AI, and pharmacology.

Overview

Microbiome Sparsification

We are making the microbiome computable.

Evolution

Metagenomics

Pretraining

Sparsification

Preprints

From Noise To Knowledge

Enabling Foundation-Model Pretraining on Noisy, Real-World Corpora.

Metagenomics

Pretraining

Publications

Foundation Models for Microbial Communities

The first multimodal foundation model for microbial communities. Combines genomics, metabolomics, and clinical data. Predicts drug-microbiome interactions at scale.

Sparsification

Pretraining

Microbiomics

Metagenomics

Publications

MetaOmics-10T

The first large-scale dataset enabling AI to predict and engineer microbiome interventions.

Pretraining

Sparsification

Microbiomics

Publications

Steering the Evolutionary Game

A new approach to understanding and controlling evolutionary dynamics in microbial systems.

Evolution

Microbiomics

Publications

MetaTrinity

Bridging the speed-accuracy gap in metagenomic classification, identifying microbial species with high precision at a fraction of the computational cost.

Sparsification

Metagenomics

Publications

AI-controlled Metagenomics

High-throughput taxonomic profiling for clinical pathogen detection and early-stage cancer screening and type classification.

Sparsification

Metagenomics

Microbiome Foundation Models

Making sense of the microbial world

Anto is building multimodal foundation models for microbial communities, making the gut microbiome computable for the first time. We predict drug toxicity and efficacy across diverse populations and optimize molecules for universal efficacy — addressing the microbiome-driven causes of drug response and failures.